Looks for DEGs after filtering that overlap with HVGs.
FindHVDEGs(object, assay, direction = c("positive", "negative", "both"))
Arguments
- object
A geneda object with DEGs$DEG set
- assay
The DEG slot to pull results from (typically a result of FilterDEGs)
- direction
One of positive, negative, or both (indicating the direction
of DEG fold change to intersect with HVGs)